Model Organism Databases
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Home > Art, Film & Photography > Model Organism Databases: Generic Model Organism Database, Zebrafish Information Network, Wormbase, Xenbase, Flybase, Beebase
Model Organism Databases: Generic Model Organism Database, Zebrafish Information Network, Wormbase, Xenbase, Flybase, Beebase

Model Organism Databases: Generic Model Organism Database, Zebrafish Information Network, Wormbase, Xenbase, Flybase, Beebase


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About the Book

Chapters: Generic Model Organism Database, Zebrafish Information Network, Wormbase, Xenbase, Flybase, Beebase. Source: Wikipedia. Pages: 26. Not illustrated. Free updates online. Purchase includes a free trial membership in the publisher's book club where you can select from more than a million books without charge. Excerpt: The Generic Model Organism Database (GMOD) Project began as an effort to create reusable software tools for developing Model Organism Databases (MODs). MODs describe genome and other information about important experimental organisms in the life sciences. Also called organism-specific databases, these databases capture the large volumes of data and information being generated by modern biology. Behind every MOD is a software system that is designed to help manage the data within the MOD, and to help users query and access those data. In the past, every MOD project developed its own software tools. GMOD is a loose federation of software applications (components) aimed at providing functionality that is needed by many or all MODs. Some of these software components are linked together by their use of a common database schema known as Chado. This project is funded by the United States National Institutes of Health, National Science Foundation and the USDA Agricultural Research Service. Chado makes extensive use of controlled vocabularies to type all entities in the database, so there is a feature table where gene, transcripts, exons, transposable elements, etc. are stored and their type is provided by the Sequence Ontology. When a new datatype comes along, the feature table requires no modification, only an update of the data in the database. The same is largely true of analysis data that can be stored in Chado as well. The existing core modules of Chado are: The full list of GMOD software components is found on the GMOD home page. These components include: The following organism databases are contributing ...More: http: //booksllc.net/?id=763727


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Product Details
  • ISBN-13: 9781158551248
  • Publisher: Books LLC
  • Publisher Imprint: Books LLC
  • Height: 152 mm
  • No of Pages: 28
  • Spine Width: 2 mm
  • Weight: 54 gr
  • ISBN-10: 115855124X
  • Publisher Date: 15 Sep 2010
  • Binding: Paperback
  • Language: English
  • Returnable: N
  • Sub Title: Generic Model Organism Database, Zebrafish Information Network, Wormbase, Xenbase, Flybase, Beebase
  • Width: 229 mm


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